STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
ebA4246Long-chain N-acyl amino acid synthase. (256 aa)    
Predicted Functional Partners:
ebA4252
Conserved hypothetical protein.
 
     0.799
moaE
Molybdenum cofactor biosynthesis protein E.
  
 0.751
ebA1229
Hypothetical protein.
  
     0.737
ebA1234
Hypothetical protein.
  
     0.735
thiG
Thiamine biosynthesis protein, gene: THIG; Catalyzes the rearrangement of 1-deoxy-D-xylulose 5-phosphate (DXP) to produce the thiazole phosphate moiety of thiamine. Sulfur is provided by the thiocarboxylate moiety of the carrier protein ThiS. In vitro, sulfur can be provided by H(2)S.
  
  
 0.717
ebA1237
Hypothetical protein.
  
     0.715
ebA6153
Hypothetical protein.
 
 
 0.695
ebA36
Conserved hypothetical protein.
 
     0.677
moeY
Hypothetical protein, possible molybdopterin biosynthesis protein MoeY.
 
     0.674
ebA5355
Putative tungsten-containing aldehyde ferredoxin oxidoreductase (AOR-1).
 
 
 0.651
Your Current Organism:
Aromatoleum aromaticum
NCBI taxonomy Id: 76114
Other names: A. aromaticum EbN1, Aromatoleum aromaticum EbN1, Aromatoleum aromaticum str. EbN1, Aromatoleum aromaticum strain EbN1, Azoarcus sp. EbN1
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