Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
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colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
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[Homology]
Score
ebA4261Conserved hypothetical protein. (518 aa)    
Predicted Functional Partners:
atpE
F0-ATP synthase, c subunit; F(1)F(0) ATP synthase produces ATP from ADP in the presence of a proton or sodium gradient. F-type ATPases consist of two structural domains, F(1) containing the extramembraneous catalytic core and F(0) containing the membrane proton channel, linked together by a central stalk and a peripheral stalk. During catalysis, ATP synthesis in the catalytic domain of F(1) is coupled via a rotary mechanism of the central stalk subunits to proton translocation.
  
 0.979
ebA4258
Polysaccharide deacetylase.
 
     0.955
ebA4259
Conserved hypothetical protein.
 
     0.952
ebA4262
Glycosyl transferase group 1.
 
   
 0.951
ebA4266
Glycosyl transferases group 1.
 
   
 0.946
ebA4264
Glycosyl transferase, group 1.
 
   
 0.941
ebA4256
General secretion pathway protein-related protein.
 
  
 0.916
ebA4249
Polysaccharide chain length determinant protein.
 
     0.906
ebA4250
Probable exopolysaccharide biosynthesis protein.
 
    0.903
asnB
Amidotransferase class-II, similar to asparagine synthase (glutamine-hydrolyzing).
 
     0.885
Your Current Organism:
Aromatoleum aromaticum
NCBI taxonomy Id: 76114
Other names: A. aromaticum EbN1, Aromatoleum aromaticum EbN1, Aromatoleum aromaticum str. EbN1, Aromatoleum aromaticum strain EbN1, Azoarcus sp. EbN1
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