STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
ebA4266Glycosyl transferases group 1. (408 aa)    
Predicted Functional Partners:
ebA4262
Glycosyl transferase group 1.
     0.959
ebA4264
Glycosyl transferase, group 1.
 
     0.951
ebA4261
Conserved hypothetical protein.
 
   
 0.950
ebA4258
Polysaccharide deacetylase.
 
  
 0.942
ebA4259
Conserved hypothetical protein.
 
     0.942
ebA4249
Polysaccharide chain length determinant protein.
 
  
 0.898
asnB
Amidotransferase class-II, similar to asparagine synthase (glutamine-hydrolyzing).
 
  
 0.894
ebA4277
Conserved hypothetical membrane protein; potential lipid A core-O-antigen ligase.
 
  
 0.887
wza
Putative polysaccharide export protein.
 
  
 0.869
ebA4250
Probable exopolysaccharide biosynthesis protein.
 
  
 0.867
Your Current Organism:
Aromatoleum aromaticum
NCBI taxonomy Id: 76114
Other names: A. aromaticum EbN1, Aromatoleum aromaticum EbN1, Aromatoleum aromaticum str. EbN1, Aromatoleum aromaticum strain EbN1, Azoarcus sp. EbN1
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