STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
algDGDP-mannose 6-dehydrogenase. (438 aa)    
Predicted Functional Partners:
algA
Putative mannose-1-phosphate guanylyltransferase; Belongs to the mannose-6-phosphate isomerase type 2 family.
 
 
 0.963
xanB
Fragment of xanthan biosynthesis protein xanB [Includes: Mannose-6-phosphate isomerase (EC 5.3.1.8) (Phosphomannose isomerase) (PMI) (Phosphohexomutase); Mannose-1-phosphate guanylyl transferase (GDP) (EC 2.7.7.22) (GDP-mannose pyrophosphorylase).
  
 
 0.918
ebA5887
Probable NAD dependent epimerase/dehydratase, possibly involved in polysaccharide biosynthesis.
  
 
 0.900
ebA4266
Glycosyl transferases group 1.
  
  
 0.846
ebA4264
Glycosyl transferase, group 1.
  
  
 0.844
ebA4271
Hypothetical protein.
  
  
 0.844
ebA4262
Glycosyl transferase group 1.
 
  
 0.838
manX
Phosphotransferase, mannose/fructose-specific component IIA.
     
  0.800
ebA4269
Hypothetical protein.
       0.784
asnB
Amidotransferase class-II, similar to asparagine synthase (glutamine-hydrolyzing).
     
 0.781
Your Current Organism:
Aromatoleum aromaticum
NCBI taxonomy Id: 76114
Other names: A. aromaticum EbN1, Aromatoleum aromaticum EbN1, Aromatoleum aromaticum str. EbN1, Aromatoleum aromaticum strain EbN1, Azoarcus sp. EbN1
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