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STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
ebA4271Hypothetical protein. (117 aa)    
Predicted Functional Partners:
algD
GDP-mannose 6-dehydrogenase.
  
  
 0.844
asnB
Amidotransferase class-II, similar to asparagine synthase (glutamine-hydrolyzing).
  
  
 0.776
ebA4265
Amidotransferase, similar to asparagine synthase (glutamine-hydrolyzing).
  
  
 0.776
ebA4266
Glycosyl transferases group 1.
       0.776
ebA4264
Glycosyl transferase, group 1.
       0.773
ebA4269
Hypothetical protein.
       0.773
tnp35
Transposase, is4 family.
       0.773
ebA4261
Conserved hypothetical protein.
     
 0.741
ebA4258
Polysaccharide deacetylase.
  
  
 0.740
ebA4259
Conserved hypothetical protein.
       0.736
Your Current Organism:
Aromatoleum aromaticum
NCBI taxonomy Id: 76114
Other names: A. aromaticum EbN1, Aromatoleum aromaticum EbN1, Aromatoleum aromaticum str. EbN1, Aromatoleum aromaticum strain EbN1, Azoarcus sp. EbN1
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