STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
ebA4275Putative glycosyl transferase, gene fragment. (283 aa)    
Predicted Functional Partners:
ebA4277
Conserved hypothetical membrane protein; potential lipid A core-O-antigen ligase.
 
  
 0.851
ebA4266
Glycosyl transferases group 1.
 
     0.750
ebA4259
Conserved hypothetical protein.
 
     0.733
ebA5881
Predicted glycosyl transferase.
  
     0.726
ebA4261
Conserved hypothetical protein.
 
   
 0.700
algD
GDP-mannose 6-dehydrogenase.
 
  
 0.669
ebA4258
Polysaccharide deacetylase.
 
  
 0.660
ebA4264
Glycosyl transferase, group 1.
 
    
0.657
asnB
Amidotransferase class-II, similar to asparagine synthase (glutamine-hydrolyzing).
 
     0.635
ebA4262
Glycosyl transferase group 1.
 
    
0.624
Your Current Organism:
Aromatoleum aromaticum
NCBI taxonomy Id: 76114
Other names: A. aromaticum EbN1, Aromatoleum aromaticum EbN1, Aromatoleum aromaticum str. EbN1, Aromatoleum aromaticum strain EbN1, Azoarcus sp. EbN1
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