STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
ebA4277Conserved hypothetical membrane protein; potential lipid A core-O-antigen ligase. (444 aa)    
Predicted Functional Partners:
ebA4266
Glycosyl transferases group 1.
 
  
 0.886
ebA4258
Polysaccharide deacetylase.
 
   
 0.884
ebA4264
Glycosyl transferase, group 1.
 
  
 0.884
ebA4261
Conserved hypothetical protein.
 
     0.880
ebA4262
Glycosyl transferase group 1.
 
  
 0.879
ebA4259
Conserved hypothetical protein.
 
     0.876
ebA4249
Polysaccharide chain length determinant protein.
 
  
 0.871
wza
Putative polysaccharide export protein.
 
  
 0.866
ebA4275
Putative glycosyl transferase, gene fragment.
 
  
 0.851
ebA4250
Probable exopolysaccharide biosynthesis protein.
 
  
 0.843
Your Current Organism:
Aromatoleum aromaticum
NCBI taxonomy Id: 76114
Other names: A. aromaticum EbN1, Aromatoleum aromaticum EbN1, Aromatoleum aromaticum str. EbN1, Aromatoleum aromaticum strain EbN1, Azoarcus sp. EbN1
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.