STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
ebA4284Predicted molecular weight phosphotyrosine protein phosphatase. (175 aa)    
Predicted Functional Partners:
capC
Capsular polysaccharide biosynthesis protein.
     
 0.905
ebA5440
Low molecular weight phosphotyrosine protein phosphatase.
     
  0.900
ebA4278
Hypothetical protein.
 
     0.794
ebA4281
Conserved hypothetical protein.
       0.773
ebA4285
Amidotransferase, similar to asparagine synthase.
       0.594
trxC
Putative thioredoxin.
  
 
 0.542
trxA
Thioredoxin; Belongs to the thioredoxin family.
  
 
 0.542
ebA5001
Putative sodium bile acid symporter family protein.
  
  
 0.488
hflC
Putative membrane-bound regulator HflC; HflC and HflK could regulate a protease.
  
    0.454
engB
GTP-binding protein; Necessary for normal cell division and for the maintenance of normal septation; Belongs to the TRAFAC class TrmE-Era-EngA-EngB-Septin-like GTPase superfamily. EngB GTPase family.
  
    0.425
Your Current Organism:
Aromatoleum aromaticum
NCBI taxonomy Id: 76114
Other names: A. aromaticum EbN1, Aromatoleum aromaticum EbN1, Aromatoleum aromaticum str. EbN1, Aromatoleum aromaticum strain EbN1, Azoarcus sp. EbN1
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