Export your current network:
... as a vector graphic:
SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc
... as short tabular text output:
TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)
... as tabular text output:
TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)
... as an XML summary:
structured XML interaction data, according to the 'PSI-MI' data standard
... protein node degrees:
node degree of proteins in your network (given the current score cut-off)
... network coordinates:
a flat-file format describing the coordinates and colors of nodes in the network
... protein sequences:
MFA: multi-fasta format - containing the aminoacid sequences in the network
... protein annotations:
a tab-delimited file describing the names, domains and descriptions of proteins in your network
... functional annotations:
a tab-delimited file containing all known functional terms of proteins in your network
Browse interactions in tabular form:
| node1 | node2 | node1 accession | node2 accession | node1 annotation | node2 annotation | score |
| coq7 | ebA4291 | ebA942 | ebA4291 | Predicted Ubiquinone biosynthesis protein COQ7; Catalyzes the hydroxylation of 2-nonaprenyl-3-methyl-6- methoxy-1,4-benzoquinol during ubiquinone biosynthesis. | Probable methyltransferase. | 0.929 |
| coq7 | ubiB | ebA942 | ebA3613 | Predicted Ubiquinone biosynthesis protein COQ7; Catalyzes the hydroxylation of 2-nonaprenyl-3-methyl-6- methoxy-1,4-benzoquinol during ubiquinone biosynthesis. | Predicted ABC1 family protein; Is probably a protein kinase regulator of UbiI activity which is involved in aerobic coenzyme Q (ubiquinone) biosynthesis. | 0.448 |
| coq7 | ubiE | ebA942 | ebA3016 | Predicted Ubiquinone biosynthesis protein COQ7; Catalyzes the hydroxylation of 2-nonaprenyl-3-methyl-6- methoxy-1,4-benzoquinol during ubiquinone biosynthesis. | Ubiquinone/menaquinone biosynthesis methyltransferase ubiE; Methyltransferase required for the conversion of demethylmenaquinol (DMKH2) to menaquinol (MKH2) and the conversion of 2-polyprenyl-6-methoxy-1,4-benzoquinol (DDMQH2) to 2-polyprenyl-3- methyl-6-methoxy-1,4-benzoquinol (DMQH2). | 0.908 |
| coq7 | ubiG | ebA942 | ebA914 | Predicted Ubiquinone biosynthesis protein COQ7; Catalyzes the hydroxylation of 2-nonaprenyl-3-methyl-6- methoxy-1,4-benzoquinol during ubiquinone biosynthesis. | 3-demethylubiquinone-9 3-methyltransferase; O-methyltransferase that catalyzes the 2 O-methylation steps in the ubiquinone biosynthetic pathway; Belongs to the methyltransferase superfamily. UbiG/COQ3 family. | 0.943 |
| ebA1729 | ebA4291 | ebA1729 | ebA4291 | Methyltransferase. | Probable methyltransferase. | 0.452 |
| ebA4098 | ebA4291 | ebA4098 | ebA4291 | Flavoprotein monooxygenase (probable aromatic-ring hydroxylase). | Probable methyltransferase. | 0.924 |
| ebA4098 | ubiB | ebA4098 | ebA3613 | Flavoprotein monooxygenase (probable aromatic-ring hydroxylase). | Predicted ABC1 family protein; Is probably a protein kinase regulator of UbiI activity which is involved in aerobic coenzyme Q (ubiquinone) biosynthesis. | 0.466 |
| ebA4098 | ubiG | ebA4098 | ebA914 | Flavoprotein monooxygenase (probable aromatic-ring hydroxylase). | 3-demethylubiquinone-9 3-methyltransferase; O-methyltransferase that catalyzes the 2 O-methylation steps in the ubiquinone biosynthetic pathway; Belongs to the methyltransferase superfamily. UbiG/COQ3 family. | 0.967 |
| ebA4291 | coq7 | ebA4291 | ebA942 | Probable methyltransferase. | Predicted Ubiquinone biosynthesis protein COQ7; Catalyzes the hydroxylation of 2-nonaprenyl-3-methyl-6- methoxy-1,4-benzoquinol during ubiquinone biosynthesis. | 0.929 |
| ebA4291 | ebA1729 | ebA4291 | ebA1729 | Probable methyltransferase. | Methyltransferase. | 0.452 |
| ebA4291 | ebA4098 | ebA4291 | ebA4098 | Probable methyltransferase. | Flavoprotein monooxygenase (probable aromatic-ring hydroxylase). | 0.924 |
| ebA4291 | ebA4292 | ebA4291 | ebA4292 | Probable methyltransferase. | Conserved hypothetical protein, possibly glycosyltransferase. | 0.556 |
| ebA4291 | exoV | ebA4291 | ebA4294 | Probable methyltransferase. | Succinoglycan biosynthesis protein. | 0.426 |
| ebA4291 | ubiB | ebA4291 | ebA3613 | Probable methyltransferase. | Predicted ABC1 family protein; Is probably a protein kinase regulator of UbiI activity which is involved in aerobic coenzyme Q (ubiquinone) biosynthesis. | 0.501 |
| ebA4291 | ubiE | ebA4291 | ebA3016 | Probable methyltransferase. | Ubiquinone/menaquinone biosynthesis methyltransferase ubiE; Methyltransferase required for the conversion of demethylmenaquinol (DMKH2) to menaquinol (MKH2) and the conversion of 2-polyprenyl-6-methoxy-1,4-benzoquinol (DDMQH2) to 2-polyprenyl-3- methyl-6-methoxy-1,4-benzoquinol (DMQH2). | 0.514 |
| ebA4291 | ubiG | ebA4291 | ebA914 | Probable methyltransferase. | 3-demethylubiquinone-9 3-methyltransferase; O-methyltransferase that catalyzes the 2 O-methylation steps in the ubiquinone biosynthetic pathway; Belongs to the methyltransferase superfamily. UbiG/COQ3 family. | 0.922 |
| ebA4291 | ubiH | ebA4291 | ebA1148 | Probable methyltransferase. | 2-octaprenyl-6-methoxyphenol hydroxylase oxidoreductase. | 0.924 |
| ebA4292 | ebA4291 | ebA4292 | ebA4291 | Conserved hypothetical protein, possibly glycosyltransferase. | Probable methyltransferase. | 0.556 |
| ebA4292 | exoV | ebA4292 | ebA4294 | Conserved hypothetical protein, possibly glycosyltransferase. | Succinoglycan biosynthesis protein. | 0.676 |
| exoV | ebA4291 | ebA4294 | ebA4291 | Succinoglycan biosynthesis protein. | Probable methyltransferase. | 0.426 |
page 1 of 3