Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
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Co-expression
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[Homology]
Score
exoVSuccinoglycan biosynthesis protein. (280 aa)    
Predicted Functional Partners:
ebA4295
Putative exopolysaccharide export protein, possibly related with succinoglycan synthesis.
  
  
 0.688
ebA4292
Conserved hypothetical protein, possibly glycosyltransferase.
  
  
 0.665
lysA-2
Ornithine/diaminopimelate/arginine decarboxylase, family 2.
  
    0.549
fadD
AMP-generating CoA ligase.
 
 
   0.522
exoW
Putative glycosyltransferase, possibly involved in succinoglycan biosynthesis protein.
 
   
 0.450
ebB174
Conserved hypothetical protein; Belongs to the UPF0337 (CsbD) family.
  
    0.442
wcaJ
Colanic biosynthesis UDP-glucose lipid carrier transferase.
  
  
 0.435
wza
Putative polysaccharide export protein.
 
  
 0.430
ebA4291
Probable methyltransferase.
  
  
 0.429
Your Current Organism:
Aromatoleum aromaticum
NCBI taxonomy Id: 76114
Other names: A. aromaticum EbN1, Aromatoleum aromaticum EbN1, Aromatoleum aromaticum str. EbN1, Aromatoleum aromaticum strain EbN1, Azoarcus sp. EbN1
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