STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
exoVSuccinoglycan biosynthesis protein. (280 aa)    
Predicted Functional Partners:
ebA4295
Putative exopolysaccharide export protein, possibly related with succinoglycan synthesis.
  
  
 0.688
ebA4292
Conserved hypothetical protein, possibly glycosyltransferase.
  
 
 0.676
lysA-2
Ornithine/diaminopimelate/arginine decarboxylase, family 2.
  
    0.547
fadD
AMP-generating CoA ligase.
 
 
 
 0.528
wza
Putative polysaccharide export protein.
 
  
 0.447
ebB174
Conserved hypothetical protein; Belongs to the UPF0337 (CsbD) family.
  
    0.443
wcaJ
Colanic biosynthesis UDP-glucose lipid carrier transferase.
  
  
 0.435
ebA4291
Probable methyltransferase.
  
  
 0.426
exoW
Putative glycosyltransferase, possibly involved in succinoglycan biosynthesis protein.
 
     0.420
ebA5887
Probable NAD dependent epimerase/dehydratase, possibly involved in polysaccharide biosynthesis.
  
 
 0.401
Your Current Organism:
Aromatoleum aromaticum
NCBI taxonomy Id: 76114
Other names: A. aromaticum EbN1, Aromatoleum aromaticum EbN1, Aromatoleum aromaticum str. EbN1, Aromatoleum aromaticum strain EbN1, Azoarcus sp. EbN1
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.