STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
ebA4295Putative exopolysaccharide export protein, possibly related with succinoglycan synthesis. (486 aa)    
Predicted Functional Partners:
wcaJ
Colanic biosynthesis UDP-glucose lipid carrier transferase.
 
  
 0.848
lysA-2
Ornithine/diaminopimelate/arginine decarboxylase, family 2.
 
     0.840
ebA5887
Probable NAD dependent epimerase/dehydratase, possibly involved in polysaccharide biosynthesis.
  
  
 0.827
ebA4277
Conserved hypothetical membrane protein; potential lipid A core-O-antigen ligase.
 
  
 0.809
ebA4250
Probable exopolysaccharide biosynthesis protein.
 
  
 0.770
rmlC
DTDP-4-dehydrorhamnose 3,5-epimerase; Catalyzes the epimerization of the C3' and C5'positions of dTDP-6-deoxy-D-xylo-4-hexulose, forming dTDP-6-deoxy-L-lyxo-4-hexulose. Belongs to the dTDP-4-dehydrorhamnose 3,5-epimerase family.
  
  
 0.762
sthA
Putative glycosyltransferase.
 
  
 0.759
ebA4249
Polysaccharide chain length determinant protein.
 
  
 0.758
ebA4292
Conserved hypothetical protein, possibly glycosyltransferase.
 
  
 0.757
rffG
DTDP-glucose 4,6-dehydratase; Belongs to the NAD(P)-dependent epimerase/dehydratase family. dTDP-glucose dehydratase subfamily.
  
  
 0.746
Your Current Organism:
Aromatoleum aromaticum
NCBI taxonomy Id: 76114
Other names: A. aromaticum EbN1, Aromatoleum aromaticum EbN1, Aromatoleum aromaticum str. EbN1, Aromatoleum aromaticum strain EbN1, Azoarcus sp. EbN1
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