STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
fadDAMP-generating CoA ligase. (546 aa)    
Predicted Functional Partners:
lysA-2
Ornithine/diaminopimelate/arginine decarboxylase, family 2.
 
  
 0.916
ebA4303
Conserved hypothetical protein; possible esterase/lipase/thioesterase.
 
   
 0.833
ebA4300
Hypothetical protein; possible esterase/lipase/thioesterase.
 
   
 0.830
fadB
Alpha-subunit of fatty acid oxidation complex.
  
 
 0.759
ebA4295
Putative exopolysaccharide export protein, possibly related with succinoglycan synthesis.
 
   
 0.723
ebA4259
Conserved hypothetical protein.
  
     0.703
ebA38
Sensory transduction histidine kinase.
  
   
 0.696
fdhB
Formate dehydrogenase, NAD(P) reducing, beta subunit.
    
 
 0.691
ebA4261
Conserved hypothetical protein.
 
     0.681
ebA1174
Conserved hypothetical protein.
  
     0.680
Your Current Organism:
Aromatoleum aromaticum
NCBI taxonomy Id: 76114
Other names: A. aromaticum EbN1, Aromatoleum aromaticum EbN1, Aromatoleum aromaticum str. EbN1, Aromatoleum aromaticum strain EbN1, Azoarcus sp. EbN1
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.