STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
ebA4317CoA ligase, possible involved in capsular antigen synthesis (related to CapK protein). (487 aa)    
Predicted Functional Partners:
ebA4315
Conserved hypothetical protein.
 
     0.935
padB
Phenylacetyl-CoA:acceptor oxidoreductase; Belongs to the prokaryotic molybdopterin-containing oxidoreductase family.
     
 0.912
padA
Phenylacetyl-CoA:acceptor oxidoreductase; Required for formate dehydrogenase (FDH) activity. Acts as a sulfur carrier protein that transfers sulfur from IscS to the molybdenum cofactor prior to its insertion into FDH. Belongs to the FdhD family.
     
  0.900
padC
Phenylacetyl-CoA:acceptor oxidoreductase.
     
  0.900
padD
Phenylacetyl-CoA:acceptor oxidoreductase.
     
  0.900
ebA4319
Conserved hypothetical protein.
 
     0.816
ebA4313
Hypothetical protein.
       0.773
ebA4259
Conserved hypothetical protein.
 
     0.726
ebA4277
Conserved hypothetical membrane protein; potential lipid A core-O-antigen ligase.
 
    0.725
ebA4262
Glycosyl transferase group 1.
 
     0.714
Your Current Organism:
Aromatoleum aromaticum
NCBI taxonomy Id: 76114
Other names: A. aromaticum EbN1, Aromatoleum aromaticum EbN1, Aromatoleum aromaticum str. EbN1, Aromatoleum aromaticum strain EbN1, Azoarcus sp. EbN1
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