Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
ebA4328Hypothetical protein. (410 aa)    
Predicted Functional Partners:
ebA1174
Conserved hypothetical protein.
  
     0.718
ebA4259
Conserved hypothetical protein.
  
     0.683
ebA4258
Polysaccharide deacetylase.
  
   
 0.680
ebA4277
Conserved hypothetical membrane protein; potential lipid A core-O-antigen ligase.
 
   
 0.680
ebA1173
Conserved hypothetical protein.
  
     0.666
argB
Acetylglutamate kinase; Catalyzes the ATP-dependent phosphorylation of N-acetyl-L- glutamate; Belongs to the acetylglutamate kinase family. ArgB subfamily.
       0.664
ebA7184
Hypothetical protein.
  
  
 0.640
ebA4261
Conserved hypothetical protein.
  
     0.630
ebA6814
Probable periplasmic lipid esterase.
  
 
 0.616
ebA38
Sensory transduction histidine kinase.
  
   
 0.614
Your Current Organism:
Aromatoleum aromaticum
NCBI taxonomy Id: 76114
Other names: A. aromaticum EbN1, Aromatoleum aromaticum EbN1, Aromatoleum aromaticum str. EbN1, Aromatoleum aromaticum strain EbN1, Azoarcus sp. EbN1
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