STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
ebA4360Conserved hypothetical protein, radical SAM family. (332 aa)    
Predicted Functional Partners:
ebA1114
Conserved hypothetical protein.
 
     0.798
ebA1112
Conserved hypothetical protein,predicted glycosyl transferase family 2.
 
     0.787
ebA4361
Hypothetical protein.
       0.773
merA
Similar to mercuric reductase.
 
   
 0.593
cfA
Probable cyclopropane-fatty-acyl-phospholipid synthase protein.
  
    0.583
ebB153
Predicted carboxymuconolactone decarboxylase; Antioxidant protein with alkyl hydroperoxidase activity. Required for the reduction of the AhpC active site cysteine residues and for the regeneration of the AhpC enzyme activity. Belongs to the AhpD family.
 
    0.545
nosR
NosR transcription regulator (N-terminal domain), contains 4Fe-4S cluster.
  
  
 0.476
nosR-2
NosR (C-terminal domain).
  
  
 0.476
Your Current Organism:
Aromatoleum aromaticum
NCBI taxonomy Id: 76114
Other names: A. aromaticum EbN1, Aromatoleum aromaticum EbN1, Aromatoleum aromaticum str. EbN1, Aromatoleum aromaticum strain EbN1, Azoarcus sp. EbN1
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