STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
ahpCPredicted peroxiredoxin. (199 aa)    
Predicted Functional Partners:
trxB
Thioredoxin reductase.
  
 
 0.827
trxB-2
FAD-dependent pyridine nucleotide-disulphide oxidoreductase.
  
 
 0.827
fur
Ferric uptake regulation protein (Ferric uptake regulator); Belongs to the Fur family.
  
  
 0.770
dsbA
Thiol:disulfide interchange protein dsbA precursor.
  
 0.761
katA
Catalase; Belongs to the catalase family.
  
 
 0.755
btuE
Putative glutathione peroxidase protein; Belongs to the glutathione peroxidase family.
   
 
 0.752
norVW
Fusion protein of nitric oxide reductase (flavorubredoxin NorV) with its associated reductase (NorW).
  
  
 0.733
ebA3480
Hypothetical protein.
  
 0.727
ccmG
Cytochrome c biogenesis protein.
  
 0.727
ebA6064
Probable thioredoxin-like protein.
  
 0.727
Your Current Organism:
Aromatoleum aromaticum
NCBI taxonomy Id: 76114
Other names: A. aromaticum EbN1, Aromatoleum aromaticum EbN1, Aromatoleum aromaticum str. EbN1, Aromatoleum aromaticum strain EbN1, Azoarcus sp. EbN1
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