STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
ebA4458Probable short chain dehydrogenase. (243 aa)    
Predicted Functional Partners:
ebA4131
Probable short chain oxidoreductase; Belongs to the short-chain dehydrogenases/reductases (SDR) family.
 
  
 0.547
bbsC
Subunit of 2-[hydroxy(phenyl)methyl]-succinyl-CoA DH.
 
  
 0.536
murI
Glutamate racemase (EC 5.1.1.3), gene: MURI OR GLR OR NMA2026 OR NMB0458; Provides the (R)-glutamate required for cell wall biosynthesis.
       0.518
ebA5670
Putative dehydrogenase (Short chain alcohol dehydrogenase).
 
  
 0.503
ebA4663
Glutathione S-transferase family protein.
  
  
 0.491
ebA723
Putative alcohol dehydrogenase.
 
  
 0.487
adh-2
Short-chain dehydrogenase/reductase,possibly involved in polyhydroxybutyrate (PHB) synthesis; Belongs to the short-chain dehydrogenases/reductases (SDR) family.
 
  
 0.478
ebA1583
Hypothetical protein.
  
    0.477
ebA309
Putative dehydrogenase.
 
  
 0.469
ebA169
Fusion protein of probable Na-dependent permease domain and histidine kinase domain of putative two-component sensor.
  
    0.441
Your Current Organism:
Aromatoleum aromaticum
NCBI taxonomy Id: 76114
Other names: A. aromaticum EbN1, Aromatoleum aromaticum EbN1, Aromatoleum aromaticum str. EbN1, Aromatoleum aromaticum strain EbN1, Azoarcus sp. EbN1
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