STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
ebA4487Regulatory protein, GntR. (216 aa)    
Predicted Functional Partners:
glcD
Glycolate oxidase (FAD-linked subunit) oxidoreductase protein.
  
  
 0.789
gntR
Transcriptional regulator.
 
  
 0.776
ebA4048
Putative transcription regulator protein, IclR family.
 
  
 0.681
ebA5646
Transcriptional regulatory protein of IclR family.
 
  
 0.656
ebA6693
Transcription regulator protein.
  
  
 0.606
c2A175
Transcriptional regulator.
 
  
 0.562
glcF
Glycolate oxidase (Iron-sulfur subunit) protein.
     
 0.527
glcE
FAD linked oxidase.
  
  
 0.509
ebA2995
Transcriptional regulator, lysR family; Belongs to the LysR transcriptional regulatory family.
  
  
 0.485
accD
Putative acetyl-coenzyme A carboxylase carboxyl transferase (Subunit beta) protein; Component of the acetyl coenzyme A carboxylase (ACC) complex. Biotin carboxylase (BC) catalyzes the carboxylation of biotin on its carrier protein (BCCP) and then the CO(2) group is transferred by the transcarboxylase to acetyl-CoA to form malonyl-CoA; Belongs to the AccD/PCCB family.
  
  
 0.484
Your Current Organism:
Aromatoleum aromaticum
NCBI taxonomy Id: 76114
Other names: A. aromaticum EbN1, Aromatoleum aromaticum EbN1, Aromatoleum aromaticum str. EbN1, Aromatoleum aromaticum strain EbN1, Azoarcus sp. EbN1
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