Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene fusion
Co-occurrence
Co-expression
Experiments
Databases
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[Homology]
Score
ugpQGlycerophosphoryl diester phosphodiesterase. (266 aa)    
Predicted Functional Partners:
ebA4507
Similar to glycerol-3-phosphate-binding periplasmic protein.
 
  
 0.914
glpK
Glycerol kinase; Key enzyme in the regulation of glycerol uptake and metabolism. Catalyzes the phosphorylation of glycerol to yield sn- glycerol 3-phosphate; Belongs to the FGGY kinase family.
 
  
 0.817
ispB
Polyprenyl synthetase (EC 2.5.1.-), gene: ISPB OR NE1915; Belongs to the FPP/GGPP synthase family.
     
 0.631
pgsA
CDP-diacylglycerol--glycerol-3-phosphatidyltrans ferase; Belongs to the CDP-alcohol phosphatidyltransferase class-I family.
  
 
 0.620
ebA3362
Hypothetical protein.
   
 
 0.600
ebA6699
Hypothetical protein.
   
 
 0.600
ebA4463
Putative glycerol-3-phosphate dehydrogenase.
 
 
 0.587
pstA
Phosphate ABC transporter, permease protein.
  
  
 0.478
ebA5705
CoA ligase, AMP generating (three fragments in different reading frames).
  
 
 0.477
ebA6822
Conserved hypothetical protein.
  
 
 
 0.473
Your Current Organism:
Aromatoleum aromaticum
NCBI taxonomy Id: 76114
Other names: A. aromaticum EbN1, Aromatoleum aromaticum EbN1, Aromatoleum aromaticum str. EbN1, Aromatoleum aromaticum strain EbN1, Azoarcus sp. EbN1
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