STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
cycADi-heme cytochrome c (class I), probably related to cytochrome c oxidase function. (277 aa)    
Predicted Functional Partners:
coxC-2
Subunit III of cytochrome c oxidase,also similar to C-terminal domain of long variants of subunit I.
 
 0.993
petA
Iron-sulfur subunit of cytochrome bc1; Component of the ubiquinol-cytochrome c reductase complex (complex III or cytochrome b-c1 complex), which is a respiratory chain that generates an electrochemical potential coupled to ATP synthesis.
  
 0.986
coxB-3
Cytochrome c oxidase, subunit II.
 
 0.973
CoxA
Cytochrome c oxidase, subunit I; Belongs to the heme-copper respiratory oxidase family.
 
 0.966
petC
Cytochrome C1 subunit of cytochrome bc1.
  
 0.957
fdhB
Formate dehydrogenase, NAD(P) reducing, beta subunit.
   
 
 0.956
petB
Cytochrome B subunit of cytochrome bc1; Component of the ubiquinol-cytochrome c reductase complex (complex III or cytochrome b-c1 complex), which is a respiratory chain that generates an electrochemical potential coupled to ATP synthesis.
  
 0.954
norE
Putative additional subunit of nitric oxide reductase (Nor) complex, membrane protein.
  
 0.948
coxC
Cytochrome c oxidase, subunit III.
  
 0.948
norE-2
Putative denitrification protein NorE (EC 1.9.3.1).
  
 0.948
Your Current Organism:
Aromatoleum aromaticum
NCBI taxonomy Id: 76114
Other names: A. aromaticum EbN1, Aromatoleum aromaticum EbN1, Aromatoleum aromaticum str. EbN1, Aromatoleum aromaticum strain EbN1, Azoarcus sp. EbN1
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