Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
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colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
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[Homology]
Score
ctaCCytochrome c1, probably related to cytocrome c oxidase function. (119 aa)    
Predicted Functional Partners:
coxC-2
Subunit III of cytochrome c oxidase,also similar to C-terminal domain of long variants of subunit I.
 
 0.967
fdhB
Formate dehydrogenase, NAD(P) reducing, beta subunit.
   
 
 0.937
petA
Iron-sulfur subunit of cytochrome bc1; Component of the ubiquinol-cytochrome c reductase complex (complex III or cytochrome b-c1 complex), which is a respiratory chain that generates an electrochemical potential coupled to ATP synthesis.
  
 0.933
petC
Cytochrome C1 subunit of cytochrome bc1.
  
 0.897
CoxA
Cytochrome c oxidase, subunit I; Belongs to the heme-copper respiratory oxidase family.
 
 0.879
cycA
Di-heme cytochrome c (class I), probably related to cytochrome c oxidase function.
 
 
 
0.859
petB
Cytochrome B subunit of cytochrome bc1; Component of the ubiquinol-cytochrome c reductase complex (complex III or cytochrome b-c1 complex), which is a respiratory chain that generates an electrochemical potential coupled to ATP synthesis.
  
 0.849
ebA154
Hypothetical protein, probable membrane protein subunit of cytochrome c oxidase.
 
  
 0.809
coxX
Predicted membrane protein, putative accessory subunit of cytochrome c oxidase.
       0.776
coxA
Putative cytochrome c oxidase subunit I; Belongs to the heme-copper respiratory oxidase family.
 
 0.767
Your Current Organism:
Aromatoleum aromaticum
NCBI taxonomy Id: 76114
Other names: A. aromaticum EbN1, Aromatoleum aromaticum EbN1, Aromatoleum aromaticum str. EbN1, Aromatoleum aromaticum strain EbN1, Azoarcus sp. EbN1
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