STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
ebA4558Hypothetical protein; Belongs to the mandelate racemase/muconate lactonizing enzyme family. (255 aa)    
Predicted Functional Partners:
ebA4555
Conserved hypothetical protein.
 
     0.816
poxB
Pyruvate oxidase; Belongs to the TPP enzyme family.
 
     0.740
ebD84
Conserved hypothetical protein.
 
   
 0.569
ebA148
Predicted phosphatase homologous to the C-terminal domain of histone macroH2A1.
   
   0.568
ebA4552
Hypothetical protein.
 
   
 0.559
ebA4557
Hypothetical protein.
       0.558
ctaC
Cytochrome c1, probably related to cytocrome c oxidase function.
 
     0.489
coxB-3
Cytochrome c oxidase, subunit II.
 
     0.433
cycA
Di-heme cytochrome c (class I), probably related to cytochrome c oxidase function.
 
     0.431
dnaB
Replicative DNA helicase protein; Participates in initiation and elongation during chromosome replication; it exhibits DNA-dependent ATPase activity and contains distinct active sites for ATP binding, DNA binding, and interaction with DnaC protein, primase, and other prepriming proteins. Belongs to the helicase family. DnaB subfamily.
  
    0.401
Your Current Organism:
Aromatoleum aromaticum
NCBI taxonomy Id: 76114
Other names: A. aromaticum EbN1, Aromatoleum aromaticum EbN1, Aromatoleum aromaticum str. EbN1, Aromatoleum aromaticum strain EbN1, Azoarcus sp. EbN1
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