STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
ebA4585Conserved hypothetical protein. (196 aa)    
Predicted Functional Partners:
ebA825
Translation elongation factor G.
  
     0.519
FDXA
Ferredoxin; Ferredoxins are iron-sulfur proteins that transfer electrons in a wide variety of metabolic reactions.
       0.470
ebA7099
Hypothetical protein.
  
     0.454
korC
2-ketoglutarate: NADP oxidoreductase gamma subunit.
       0.427
korA
2-ketoglutarate: NADP oxidoreductase,alpha subunit.
       0.420
korB
2-ketoglutarate: NADP oxidoreductase, beta subunit.
       0.420
ebA4619
Conserved hypothetical protein,predicted NnrS family involved in response to NO.
 
     0.405
ebA5384
Conserved hypothetical protein, similar to putative regulatory protein involved in in phenol degradation.
  
     0.400
Your Current Organism:
Aromatoleum aromaticum
NCBI taxonomy Id: 76114
Other names: A. aromaticum EbN1, Aromatoleum aromaticum EbN1, Aromatoleum aromaticum str. EbN1, Aromatoleum aromaticum strain EbN1, Azoarcus sp. EbN1
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.