STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
ebA4594Conserved hypothetical protein. (347 aa)    
Predicted Functional Partners:
ebB83
Conserved hypothetical protein; Has lipid A 3-O-deacylase activity. Hydrolyzes the ester bond at the 3 position of lipid A, a bioactive component of lipopolysaccharide (LPS), thereby releasing the primary fatty acyl moiety; Belongs to the PagL family.
  
     0.690
ebA598
Conserved hypothetical protein,predicted sulfatase family.
  
     0.689
ebA6939
Conserved hypothetical protein.
  
     0.630
ebB157
Hypothetical protein of beta-lactamase-inhibitor family (Pfam).
  
     0.582
ebA4590
Conserved hypothetical protein,predicted membrane-bound metal-dependent hydrolase.
       0.559
ebA4593
Hypothetical protein.
       0.559
ebA3320
Probable two-component sensor.
  
     0.558
ebA4595
Hypothetical protein.
       0.542
ebA3314
Predicted PAP2 superfamily protein.
  
     0.506
metC
Cystathionine beta-lyase, putative (EC 4.4.1.8), gene: metC.
       0.429
Your Current Organism:
Aromatoleum aromaticum
NCBI taxonomy Id: 76114
Other names: A. aromaticum EbN1, Aromatoleum aromaticum EbN1, Aromatoleum aromaticum str. EbN1, Aromatoleum aromaticum strain EbN1, Azoarcus sp. EbN1
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