STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
ebA4595Hypothetical protein. (187 aa)    
Predicted Functional Partners:
metC
Cystathionine beta-lyase, putative (EC 4.4.1.8), gene: metC.
     
 0.604
ebA6153
Hypothetical protein.
  
     0.570
ebB156
Hypothetical protein.
       0.547
ebA4594
Conserved hypothetical protein.
       0.542
ebA4600
Hypothetical protein.
       0.511
ebA4601
Hypothetical protein.
       0.471
ebA4602
Hypothetical protein.
       0.471
ebB244
Hypothetical protein.
  
     0.431
tnp37
Transposase.
       0.407
ebA4590
Conserved hypothetical protein,predicted membrane-bound metal-dependent hydrolase.
       0.405
Your Current Organism:
Aromatoleum aromaticum
NCBI taxonomy Id: 76114
Other names: A. aromaticum EbN1, Aromatoleum aromaticum EbN1, Aromatoleum aromaticum str. EbN1, Aromatoleum aromaticum strain EbN1, Azoarcus sp. EbN1
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.