STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
glcGUncharacterized protein, possibly involved in utilization of glycolate or propanediol. (148 aa)    
Predicted Functional Partners:
hfi
Putative hydroxypyruvate isomerase protein; Belongs to the hyi family.
 
    0.755
hfr
Hydroxypyruvate reductase.
 
     0.732
glcF
Glycolate oxidase (Iron-sulfur subunit) protein.
 
  
 0.725
ebA3918
Predicted Fe-S oxidoreductase.
  
  
 0.637
ebA4050
Predicted Fe-S oxidoreductase.
  
  
 0.637
ebB157
Hypothetical protein of beta-lactamase-inhibitor family (Pfam).
       0.574
ackA-2
Similar to acetate kinase; Catalyzes the formation of acetyl phosphate from acetate and ATP. Can also catalyze the reverse reaction; Belongs to the acetokinase family.
  
  
 0.568
glcB
Malate synthase G; Involved in the glycolate utilization. Catalyzes the condensation and subsequent hydrolysis of acetyl-coenzyme A (acetyl- CoA) and glyoxylate to form malate and CoA; Belongs to the malate synthase family. GlcB subfamily.
  
  
 0.556
ebA4619
Conserved hypothetical protein,predicted NnrS family involved in response to NO.
       0.455
Your Current Organism:
Aromatoleum aromaticum
NCBI taxonomy Id: 76114
Other names: A. aromaticum EbN1, Aromatoleum aromaticum EbN1, Aromatoleum aromaticum str. EbN1, Aromatoleum aromaticum strain EbN1, Azoarcus sp. EbN1
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