STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
ebA4629Conserved hypothetical protein. (267 aa)    
Predicted Functional Partners:
asnA
L-asparaginase II.
       0.773
cho-2
Excinuclease Cho, similar to DNA polymerase III epsilon subunit family.
       0.491
ebA3511
Conserved hypothetical protein.
  
     0.482
ebA4319
Conserved hypothetical protein.
  
     0.471
ebB244
Hypothetical protein.
  
     0.466
ebA1698
Hypothetical protein.
  
     0.451
pchF-2
Probable p-cresol methylhydroxylase subunit.
  
     0.448
poxB
Pyruvate oxidase; Belongs to the TPP enzyme family.
  
     0.430
cpx-2
Cytochrome c peroxidase.
  
     0.422
ebA4627
Probable transcription regulator protein.
       0.405
Your Current Organism:
Aromatoleum aromaticum
NCBI taxonomy Id: 76114
Other names: A. aromaticum EbN1, Aromatoleum aromaticum EbN1, Aromatoleum aromaticum str. EbN1, Aromatoleum aromaticum strain EbN1, Azoarcus sp. EbN1
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.