STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
ebA4680Hypothetical protein, INTERPRO suggestion: probable Carbohydrate kinase. (452 aa)    
Predicted Functional Partners:
ebA4686
Conserved hypothetical protein.
 
     0.874
ebA4694
Conserved hypothetical protein.
 
     0.768
ebA7184
Hypothetical protein.
  
  
 0.640
ebA6814
Probable periplasmic lipid esterase.
  
 
 0.616
ebB160
Hypothetical protein.
       0.612
ebA6152
Conserved hypothetical protein.
 
  
 0.479
ebA3441
Conserved hypothetical protein.
  
    0.478
ebA2980
Conserved hypothetical protein.
  
     0.401
Your Current Organism:
Aromatoleum aromaticum
NCBI taxonomy Id: 76114
Other names: A. aromaticum EbN1, Aromatoleum aromaticum EbN1, Aromatoleum aromaticum str. EbN1, Aromatoleum aromaticum strain EbN1, Azoarcus sp. EbN1
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.