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STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
ebA4680Hypothetical protein, INTERPRO suggestion: probable Carbohydrate kinase. (452 aa)    
Predicted Functional Partners:
ebA4686
Conserved hypothetical protein.
 
     0.874
ebA4694
Conserved hypothetical protein.
 
     0.767
ebB160
Hypothetical protein.
       0.611
ebA7184
Hypothetical protein.
  
  
 0.604
ebA6814
Probable periplasmic lipid esterase.
  
 
 0.594
ebA6152
Conserved hypothetical protein.
 
 
 0.550
ebA3441
Conserved hypothetical protein.
  
    0.440
ebA6051
Putative sensory transduction histidine kinase of highly complex domain structure.
     
 0.406
ebA2980
Conserved hypothetical protein.
  
     0.401
Your Current Organism:
Aromatoleum aromaticum
NCBI taxonomy Id: 76114
Other names: A. aromaticum EbN1, Aromatoleum aromaticum EbN1, Aromatoleum aromaticum str. EbN1, Aromatoleum aromaticum strain EbN1, Azoarcus sp. EbN1
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.