STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
phbBAcetoacetyl-CoA reductase; Belongs to the short-chain dehydrogenases/reductases (SDR) family. (246 aa)    
Predicted Functional Partners:
phbC-2
Poly-beta-hydroxybutyrate polymerase.
 
 
 0.987
phbC-5
Poly-beta-hydroxybutyrate synthase.
  
 
 0.976
phbC
Putative poly-beta-hydroxybutyrate synthase.
  
 
 0.973
phbC-4
Putative poly-beta-hydroxyalkanoate synthase.
  
 
 0.970
phbC-6
PHA synthase subunit PhaC.
  
 
 0.967
adh-2
Short-chain dehydrogenase/reductase,possibly involved in polyhydroxybutyrate (PHB) synthesis; Belongs to the short-chain dehydrogenases/reductases (SDR) family.
 
  
 
0.951
fadB
Alpha-subunit of fatty acid oxidation complex.
  
 0.931
ebA2315
Fusion of 3-hydroxyacyl-CoA dehydrogenase and enoyl-CoA hydratase.
  
 0.931
ebA4434
Putative maoC-like dehydratase.
  
 0.926
ebA5671
Predicted MaoC-like (R)-specific enoyl-CoA hydratase.
 
 0.926
Your Current Organism:
Aromatoleum aromaticum
NCBI taxonomy Id: 76114
Other names: A. aromaticum EbN1, Aromatoleum aromaticum EbN1, Aromatoleum aromaticum str. EbN1, Aromatoleum aromaticum strain EbN1, Azoarcus sp. EbN1
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