STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
fdxAFerredoxin; Ferredoxins are iron-sulfur proteins that transfer electrons in a wide variety of metabolic reactions. (107 aa)    
Predicted Functional Partners:
fdhB
Formate dehydrogenase, NAD(P) reducing, beta subunit.
   
 
 0.779
ebA4745
Hypothetical protein.
       0.741
nuoE
NADH dehydrogenase I, chain E.
   
 
 0.681
bzdV
Uncharacterized protein; Subunit of oxidoreductase of unknown function, conserved in Azoarcus-type benzoate degradation gene clusters.
   
 
 0.665
sdhA
Succinate dehydrogenase, flavoprotein subunit; Belongs to the FAD-dependent oxidoreductase 2 family. FRD/SDH subfamily.
  
 
 0.663
fadH
2,4-dienoyl-CoA reductase.
   
 
 0.629
korC
2-ketoglutarate: NADP oxidoreductase gamma subunit.
  
 
 0.625
gltD
Glutamate synthase, small subunit.
   
 
 0.606
narA
Assimilatory nitrate reductase; Belongs to the prokaryotic molybdopterin-containing oxidoreductase family. NasA/NapA/NarB subfamily.
   
 
 0.596
fdhA
Formate dehydrogenase alpha subunit,molybdenum or tungsten enzyme; Belongs to the prokaryotic molybdopterin-containing oxidoreductase family.
   
 
 0.596
Your Current Organism:
Aromatoleum aromaticum
NCBI taxonomy Id: 76114
Other names: A. aromaticum EbN1, Aromatoleum aromaticum EbN1, Aromatoleum aromaticum str. EbN1, Aromatoleum aromaticum strain EbN1, Azoarcus sp. EbN1
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