STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
ebA4749Long chain fatty-acid CoA ligase. (555 aa)    
Predicted Functional Partners:
ebA3471
Similar to transmembrane protein.
 
 0.776
fdhB
Formate dehydrogenase, NAD(P) reducing, beta subunit.
    
 
 0.674
fadE
Long chain acyl-CoA dehydrogenase.
 
 
 0.664
ebA5705
CoA ligase, AMP generating (three fragments in different reading frames).
  
 0.642
ebA5321
Probable acyl-CoA dehydrogenase.
 
 
 0.591
ebA6506
Acyl-CoA dehydrogenase.
 
 
 0.584
rplC
50S ribosomal protein L3; One of the primary rRNA binding proteins, it binds directly near the 3'-end of the 23S rRNA, where it nucleates assembly of the 50S subunit.
   
 
 0.546
bbsG
Benzylsuccinyl-CoA dehydrogenase.
  
 
 0.530
ebA1953
Acyl-CoA dehydrogenase.
  
 
 0.530
ebA2055
Putative acyl-CoA dehydrogenase.
  
 
 0.530
Your Current Organism:
Aromatoleum aromaticum
NCBI taxonomy Id: 76114
Other names: A. aromaticum EbN1, Aromatoleum aromaticum EbN1, Aromatoleum aromaticum str. EbN1, Aromatoleum aromaticum strain EbN1, Azoarcus sp. EbN1
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