STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
ebA4796Serine/threonine-protein kinase. (453 aa)    
Predicted Functional Partners:
ebA6699
Hypothetical protein.
 
 0.946
ebA3362
Hypothetical protein.
 
 0.942
c1A229
Phosphatase 2C domain.
 
 
 0.858
ebA1663
Phosphoprotein phosphatase.
 
 
 0.858
ebA4165
Hypothetical protein.
 
 
 
 0.827
ebA1682
Putative metal-dependent phosphohydrolase, possibly cGMP-dependent 3',5'-cyclic phosphodiesterase (EC 3.1.4.17).
 
 
 
 0.707
rpoB
DNA-directed RNA polymerase, beta chain; DNA-dependent RNA polymerase catalyzes the transcription of DNA into RNA using the four ribonucleoside triphosphates as substrates.
   
 
 0.688
ebA6051
Putative sensory transduction histidine kinase of highly complex domain structure.
 
 0.688
ebA1688
Conserved hypothetical protein.
 
  
 0.660
ebA1212
Putative serine/threonine protein kinase.
 
 
0.646
Your Current Organism:
Aromatoleum aromaticum
NCBI taxonomy Id: 76114
Other names: A. aromaticum EbN1, Aromatoleum aromaticum EbN1, Aromatoleum aromaticum str. EbN1, Aromatoleum aromaticum strain EbN1, Azoarcus sp. EbN1
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.