STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
ebA4857Conserved hypothetical protein, putative endonuclease / exonuclease / phosphatase. (284 aa)    
Predicted Functional Partners:
ebA6367
Putative aminotransferase; Catalyzes the removal of elemental sulfur and selenium atoms from L-cysteine, L-cystine, L-selenocysteine, and L-selenocystine to produce L-alanine.
   
   0.681
ebA5327
Hypothetical protein; INTERPRO prediction: regulator of chromosome condensation.
  
     0.612
ebA2737
Hypothetical protein.
  
     0.558
ebA4853
Putative cation efflux protein.
       0.536
ebA4852
Hypothetical protein.
       0.523
ebA6946
Putative Phospholipase/Transphosphatidylase.
 
  
 0.486
citE
Malyl-CoA lyase or Citrate lyase, beta subunit; Belongs to the HpcH/HpaI aldolase family.
  
     0.441
ebA1675
Hypothetical protein.
  
     0.437
ebA3626
Hypothetical protein.
  
     0.408
Your Current Organism:
Aromatoleum aromaticum
NCBI taxonomy Id: 76114
Other names: A. aromaticum EbN1, Aromatoleum aromaticum EbN1, Aromatoleum aromaticum str. EbN1, Aromatoleum aromaticum strain EbN1, Azoarcus sp. EbN1
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