STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
cytC1Cytochrome c, class IC. (110 aa)    
Predicted Functional Partners:
cytC2
Cytochrome c, class IC.
  
0.942
petC
Cytochrome C1 subunit of cytochrome bc1.
 
  
 0.751
cytC4
Di-Heme cytochrome c.
  
     0.722
ebA4234
Probable transmembrane protein.
 
   
 0.669
petA
Iron-sulfur subunit of cytochrome bc1; Component of the ubiquinol-cytochrome c reductase complex (complex III or cytochrome b-c1 complex), which is a respiratory chain that generates an electrochemical potential coupled to ATP synthesis.
 
  
 0.663
ccoO
Cytochrome oxidase, cytochrome c subunit.
  
 
 0.637
ccoO-2
Cytochrome-cbb3 oxidase, subunit II.
  
 
 0.637
petB
Cytochrome B subunit of cytochrome bc1; Component of the ubiquinol-cytochrome c reductase complex (complex III or cytochrome b-c1 complex), which is a respiratory chain that generates an electrochemical potential coupled to ATP synthesis.
 
  
 0.623
ccoN
Cytochrome C oxidase subunit transmembrane protein (EC 1.9.3.1).
  
 
 0.596
ccoN-2
Cytochrome-cbb3 oxidase, subunit I; Belongs to the heme-copper respiratory oxidase family.
  
 
 0.596
Your Current Organism:
Aromatoleum aromaticum
NCBI taxonomy Id: 76114
Other names: A. aromaticum EbN1, Aromatoleum aromaticum EbN1, Aromatoleum aromaticum str. EbN1, Aromatoleum aromaticum strain EbN1, Azoarcus sp. EbN1
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