STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
ebA4893Putative iron utilization protein. (560 aa)    
Predicted Functional Partners:
ebA4918
Putative iron binding protein component of ABC iron transporter.
 
 
 0.992
ebA4892
Probable transport system ATP-binding protein; Belongs to the ABC transporter superfamily.
 
 
 0.986
ebA2111
Putative iron transport system ATP-binding protein; Belongs to the ABC transporter superfamily.
 
 
 0.971
aat
Leucyl/phenylalanyl-tRNA--protein transferase; Functions in the N-end rule pathway of protein degradation where it conjugates Leu, Phe and, less efficiently, Met from aminoacyl- tRNAs to the N-termini of proteins containing an N-terminal arginine or lysine.
       0.587
RSC2398
ATP-binding ABC transporter protein.
   
  
 0.563
ate
Putative arginyl-tRNA-protein transferase; Functions in the N-end rule pathway of protein degradation where it conjugates Leu from its aminoacyl-tRNA to the N-termini of proteins containing an N-terminal aspartate or glutamate. Belongs to the R-transferase family. Bpt subfamily.
       0.562
ebA4894
Hypothetical protein.
       0.527
ebA4019
Probable transmembrane ABC transporter protein, permease; Belongs to the binding-protein-dependent transport system permease family. FecCD subfamily.
   
  
 0.461
ebA3624
Predicted ABC-type Fe3+-hydroxamate transport system, periplasmic component.
   
  
 0.449
ebA3688
Probable substrate-binding periplasmic (PBP) ABC transporter protein.
   
  
 0.449
Your Current Organism:
Aromatoleum aromaticum
NCBI taxonomy Id: 76114
Other names: A. aromaticum EbN1, Aromatoleum aromaticum EbN1, Aromatoleum aromaticum str. EbN1, Aromatoleum aromaticum strain EbN1, Azoarcus sp. EbN1
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