STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
gspLGeneral secretion pathway protein L. (405 aa)    
Predicted Functional Partners:
gspI2
General secretion pathway protein I.
 
  
 0.954
ebA4910
Hypothetical protein.
 
  
 0.940
gspE3
General secretory pathway protein E; Involved in a type II secretion system (T2SS, formerly general secretion pathway, GSP) for the export of proteins.
 
 
 0.939
gspJ2
General secretory pathway protein J.
 
   
 0.936
gspK2
General secretory pathway protein K.
 
  
 0.935
gspD2
General secretory pathway protein D.
 
  
 0.925
ebA1610
Hypothetical protein, INTERPRO suggestion: probable Fimbrial assembly.
     
 0.909
gspG2
General secretory pathway protein G.
 
  
 0.889
gspF2
General secretion pathway protein F.
 
  
 0.851
ebA4916
Hypothetical protein.
       0.752
Your Current Organism:
Aromatoleum aromaticum
NCBI taxonomy Id: 76114
Other names: A. aromaticum EbN1, Aromatoleum aromaticum EbN1, Aromatoleum aromaticum str. EbN1, Aromatoleum aromaticum strain EbN1, Azoarcus sp. EbN1
Server load: medium (42%) [HD]
STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.