STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
gspJ2General secretory pathway protein J. (184 aa)    
Predicted Functional Partners:
gspI2
General secretion pathway protein I.
 
 
 0.996
gspK2
General secretory pathway protein K.
 
 
 0.994
ebA4910
Hypothetical protein.
 
 
 0.983
gspG2
General secretory pathway protein G.
 
 
 0.964
gspD2
General secretory pathway protein D.
 
  
 0.948
gspL
General secretion pathway protein L.
 
   
 0.935
gspJ
General secretion pathway protein J.
     
  0.900
gspK
General secretory pathway protein K.
  
 
 0.894
gspF2
General secretion pathway protein F.
 
  
 0.880
gspE3
General secretory pathway protein E; Involved in a type II secretion system (T2SS, formerly general secretion pathway, GSP) for the export of proteins.
 
   
 0.834
Your Current Organism:
Aromatoleum aromaticum
NCBI taxonomy Id: 76114
Other names: A. aromaticum EbN1, Aromatoleum aromaticum EbN1, Aromatoleum aromaticum str. EbN1, Aromatoleum aromaticum strain EbN1, Azoarcus sp. EbN1
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.