STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
gspF2General secretion pathway protein F. (400 aa)    
Predicted Functional Partners:
gspE3
General secretory pathway protein E; Involved in a type II secretion system (T2SS, formerly general secretion pathway, GSP) for the export of proteins.
 
 
 0.976
gspG2
General secretory pathway protein G.
 
  
 0.960
gspD2
General secretory pathway protein D.
 
  
 0.947
gspI2
General secretion pathway protein I.
 
  
 0.940
pulF
Bacterial type II secretion system protein.
  
  
 
0.926
gspF
General secretion pathway protein F.
  
  
 
0.918
ebA4910
Hypothetical protein.
 
  
 0.906
pilB
Type IV fimbrial biogenesis protein,PilB.
 
 
 0.905
gspE
General secretion pathway protein E (Type II traffic warden ATPase); Involved in a type II secretion system (T2SS, formerly general secretion pathway, GSP) for the export of proteins.
 
 
 0.902
ebA1226
Putative type II secretion system protein.
 
 
 0.901
Your Current Organism:
Aromatoleum aromaticum
NCBI taxonomy Id: 76114
Other names: A. aromaticum EbN1, Aromatoleum aromaticum EbN1, Aromatoleum aromaticum str. EbN1, Aromatoleum aromaticum strain EbN1, Azoarcus sp. EbN1
Server load: medium (42%) [HD]
STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.