STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
arsDArsenate resistance operon, repressor ArsD. (118 aa)    
Predicted Functional Partners:
arsA
Arsenical pump-driving ATPase; Anion-transporting ATPase; Belongs to the arsA ATPase family.
   
 0.960
korA2
2-oxoglutarate ferredoxin oxidoreductase alpha subunit.
  
  
 0.787
korA
2-ketoglutarate: NADP oxidoreductase,alpha subunit.
  
  
 0.787
icd2
Isocitrate dehydrogenase isozyme 2,monomeric type, NADP-specific; Belongs to the monomeric-type IDH family.
  
  
 0.770
mdh
Malate dehydrogenase; Catalyzes the reversible oxidation of malate to oxaloacetate. Belongs to the LDH/MDH superfamily. MDH type 2 family.
  
  
 0.758
arsR
Transcriptional regulator ArsR family.
     
 0.754
ebA5001
Putative sodium bile acid symporter family protein.
     
 0.750
arsC
Arsenate reductase, gene: ARSC; Belongs to the low molecular weight phosphotyrosine protein phosphatase family.
     
 0.718
bzdV
Uncharacterized protein; Subunit of oxidoreductase of unknown function, conserved in Azoarcus-type benzoate degradation gene clusters.
  
 
 0.607
korC
2-ketoglutarate: NADP oxidoreductase gamma subunit.
  
 
 0.552
Your Current Organism:
Aromatoleum aromaticum
NCBI taxonomy Id: 76114
Other names: A. aromaticum EbN1, Aromatoleum aromaticum EbN1, Aromatoleum aromaticum str. EbN1, Aromatoleum aromaticum strain EbN1, Azoarcus sp. EbN1
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