STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
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[Homology]
Score
arsAArsenical pump-driving ATPase; Anion-transporting ATPase; Belongs to the arsA ATPase family. (592 aa)    
Predicted Functional Partners:
arsD
Arsenate resistance operon, repressor ArsD.
   
 0.959
arsC
Arsenate reductase, gene: ARSC; Belongs to the low molecular weight phosphotyrosine protein phosphatase family.
    
 0.844
ebA5001
Putative sodium bile acid symporter family protein.
     
 0.801
pyrF
Orotidine 5'-phosphate decarboxylase; Belongs to the OMP decarboxylase family. Type 2 subfamily.
    
 
 0.792
arsR
Transcriptional regulator ArsR family.
     
 0.783
ileS
isoleucyl-tRNA synthetase; Catalyzes the attachment of isoleucine to tRNA(Ile). As IleRS can inadvertently accommodate and process structurally similar amino acids such as valine, to avoid such errors it has two additional distinct tRNA(Ile)-dependent editing activities. One activity is designated as 'pretransfer' editing and involves the hydrolysis of activated Val-AMP. The other activity is designated 'posttransfer' editing and involves deacylation of mischarged Val-tRNA(Ile). Belongs to the class-I aminoacyl-tRNA synthetase family. IleS type 1 subfamily.
    
 
 0.660
gmk
Guanylate kinase; Essential for recycling GMP and indirectly, cGMP.
    
   0.642
ebA5585
Conserved hypothetical protein, similar to arsenate reductase subunit ArsC; Belongs to the low molecular weight phosphotyrosine protein phosphatase family.
    
 0.574
c2A200
Hypothetical protein.
    
 0.449
ebA1575
Conserved hypothetical protein.
    
 0.449
Your Current Organism:
Aromatoleum aromaticum
NCBI taxonomy Id: 76114
Other names: A. aromaticum EbN1, Aromatoleum aromaticum EbN1, Aromatoleum aromaticum str. EbN1, Aromatoleum aromaticum strain EbN1, Azoarcus sp. EbN1
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