STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
ebA5014Similar to phosphate import ATP-binding protein pstB 1; Belongs to the ABC transporter superfamily. (237 aa)    
Predicted Functional Partners:
ebA5015
Putative permease component of ABC transporter.
  
  0.981
modB1
Molybdate or tungstate transport.
 
 
  0.901
gltK
Putative ABC transporter protein,probable glutamate/aspartate transmembrane subunit.
 
 
 0.870
gltJ
Putative ABC transporter protein,probable glutamate/aspartate transmembrane subunit.
  
 
 0.868
gls1
Ferredoxin-dependent glutamate synthase.
  
  
 0.639
ebA2940
Putative iron-sulfur binding protein.
 
     0.610
dnaJ-2
DnaJ class protein.
  
   
 0.588
ebA2942
Conserved hypothetical protein.
 
     0.585
rpsK
30S ribosomal protein S11; Located on the platform of the 30S subunit, it bridges several disparate RNA helices of the 16S rRNA. Forms part of the Shine- Dalgarno cleft in the 70S ribosome; Belongs to the universal ribosomal protein uS11 family.
  
     0.584
rpsE
30S ribosomal protein S5; With S4 and S12 plays an important role in translational accuracy; Belongs to the universal ribosomal protein uS5 family.
  
     0.577
Your Current Organism:
Aromatoleum aromaticum
NCBI taxonomy Id: 76114
Other names: A. aromaticum EbN1, Aromatoleum aromaticum EbN1, Aromatoleum aromaticum str. EbN1, Aromatoleum aromaticum strain EbN1, Azoarcus sp. EbN1
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