STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
ebA5015Putative permease component of ABC transporter. (246 aa)    
Predicted Functional Partners:
ebA5014
Similar to phosphate import ATP-binding protein pstB 1; Belongs to the ABC transporter superfamily.
  
  0.981
modB1
Molybdate or tungstate transport.
 
  
 0.967
modA1
Predicted Periplasmic molybdate-binding protein/domain.
 
  
 0.812
ebA2947
Conserved hypothetical protein.
 
    0.779
ebA2939
Cytoplasmic 'private chaperone' of TorD family, probably for assembly of Mo-cofactor in formate dehydrogenase.
 
    0.777
ebA2940
Putative iron-sulfur binding protein.
 
     0.771
fdhA-2
Formate dehydrogenase, alpha subunit; Belongs to the prokaryotic molybdopterin-containing oxidoreductase family.
 
     0.770
fdhC
Putative Formate dehydrogenase subunit C.
 
     0.766
fdhD
Formate dehydrogenase accessory protein; Required for formate dehydrogenase (FDH) activity. Acts as a sulfur carrier protein that transfers sulfur from IscS to the molybdenum cofactor prior to its insertion into FDH. Belongs to the FdhD family.
 
     0.765
ebA2942
Conserved hypothetical protein.
 
     0.744
Your Current Organism:
Aromatoleum aromaticum
NCBI taxonomy Id: 76114
Other names: A. aromaticum EbN1, Aromatoleum aromaticum EbN1, Aromatoleum aromaticum str. EbN1, Aromatoleum aromaticum strain EbN1, Azoarcus sp. EbN1
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