STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
ebA5059Predicted permease. (313 aa)    
Predicted Functional Partners:
maeB2
NADP-dependent malic enzyme.
  
  
 0.713
maeB1
NADP-dependent malic enzyme.
  
  
 0.713
ebA5064
Hypothetical protein.
       0.535
ebA5068
Predicted Fe-S-cluster redox enzyme,radical SAM family; Belongs to the radical SAM superfamily. RlmN family.
       0.472
DCTP-2
Dicarboxylate transport protein.
 
     0.468
DCTP
Dicarboxylate transport, gene: DCTP OR PM1525.
 
     0.453
ebA5163
Transcriptional regulator, AraC family.
  
    0.451
dctP-2
Predicted TRAP dicarboxylate transporter, DctP subunit.
 
     0.429
Your Current Organism:
Aromatoleum aromaticum
NCBI taxonomy Id: 76114
Other names: A. aromaticum EbN1, Aromatoleum aromaticum EbN1, Aromatoleum aromaticum str. EbN1, Aromatoleum aromaticum strain EbN1, Azoarcus sp. EbN1
Server load: low (16%) [HD]
STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.