STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
ebA5117Two-component system sensor protein. (343 aa)    
Predicted Functional Partners:
ebA1169
Putative two-component system,regulatory protein.
 
 
 0.992
ebA4918
Putative iron binding protein component of ABC iron transporter.
   
   0.735
pilL
Pili chemotaxis protein similar PilL.
  
   
 0.668
pilI
Twitching motility protein PilI.
  
   
 0.583
ebA3032
Hypothetical protein.
  
  
 0.540
pilJ
Twitching motility transmembrane protein PilJ.
  
   
 0.504
ebA2423
Conserved hypothetical protein.
  
  
 0.474
ebA432
Hypothetical protein.
  
  
 0.474
pilP
Type IV fimbrial biogenesis protein PilP.
  
     0.471
ebA4764
Similar to Tfp pilus assembly protein FimV.
  
   
 0.457
Your Current Organism:
Aromatoleum aromaticum
NCBI taxonomy Id: 76114
Other names: A. aromaticum EbN1, Aromatoleum aromaticum EbN1, Aromatoleum aromaticum str. EbN1, Aromatoleum aromaticum strain EbN1, Azoarcus sp. EbN1
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.