STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
fimTType 4 fimbrial pilin related transmembrane protein similar to FimT protein. (184 aa)    
Predicted Functional Partners:
ebA5111
Hypothetical protein.
 
  
 0.826
pilV
Similar to type IV pilin protein pilV.
 
  
 0.760
ebA5109
Hypothetical protein.
 
  
 0.747
pilP
Type IV fimbrial biogenesis protein PilP.
  
  
 0.587
ebA5121
Conserved hypothetical protein,predicted peptidase aspartic family.
 
     0.586
pilE
Pilus assembly protein.
 
  
 0.561
pilN
Type IV fimbrial biogenesis protein PilN.
 
  
 0.535
pilZ
Type IV fimbrial biogenesis protein PilZ.
  
   
 0.529
pilO
Fimbrial type-IV assembly protein PilO.
 
  
 0.486
pilM
Type IV fimbrial biogenesis protein PilM.
 
   
 0.425
Your Current Organism:
Aromatoleum aromaticum
NCBI taxonomy Id: 76114
Other names: A. aromaticum EbN1, Aromatoleum aromaticum EbN1, Aromatoleum aromaticum str. EbN1, Aromatoleum aromaticum strain EbN1, Azoarcus sp. EbN1
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