STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
ebA5146Conserved hypothetical protein. (183 aa)    
Predicted Functional Partners:
ebA5142
Conserved hypothetical protein, putativ NnrS family.
 
     0.834
sirB
Predicted Invasion gene expression up-regulator, SirB.
 
     0.820
ebA3532
Conserved hypothetical protein.
 
     0.653
dnr
Transcriptional regulator, Dnr/Nnr type.
       0.548
ebA6811
Conserved hypothetical protein,potential squalene/phytoene dehydrogenase.
  
     0.517
ebA3188
Conserved hypothetical protein.
  
     0.515
ebD73
Conserved hypothetical protein.
  
     0.499
ebB228
Conserved hypothetical protein.
  
     0.489
ebA2640
Hypothetical protein.
  
     0.487
ebA4071
Hypothetical protein.
  
     0.485
Your Current Organism:
Aromatoleum aromaticum
NCBI taxonomy Id: 76114
Other names: A. aromaticum EbN1, Aromatoleum aromaticum EbN1, Aromatoleum aromaticum str. EbN1, Aromatoleum aromaticum strain EbN1, Azoarcus sp. EbN1
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.