STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
tonBPredicted gram-negative bacterial tonB protein. (265 aa)    
Predicted Functional Partners:
exbB
MotA/TolQ/ExbB proton channel family protein.
 
 
 0.935
exbD1
Biopolymer transport protein ExbD/TolR.
 
 
 0.882
ebA6096
Predicted TonB-dependent receptor protein.
  
 
 0.853
exbD2
Biopolymer transport protein ExbD/TolR.
 
 
 0.817
tolR
Biopolymer transport protein ExbD/TolR.
  
 
 0.797
ebA2473
Hypothetical gene.
  
 
 0.769
ebA4013
Putative TONB-dependent receptor.
 
 
 
 0.753
tolQ
TOLQ-related transport transmembrane protein; Part of the Tol-Pal system, which plays a role in outer membrane invagination during cell division and is important for maintaining outer membrane integrity.
  
 
 0.748
hemR
Hemin receptor precursor, TonB-dependent outer membrane uptake protein.
 
 
 0.742
exbB2
MotA/TolQ/ExbB proton channel family protein.
  
 
 0.734
Your Current Organism:
Aromatoleum aromaticum
NCBI taxonomy Id: 76114
Other names: A. aromaticum EbN1, Aromatoleum aromaticum EbN1, Aromatoleum aromaticum str. EbN1, Aromatoleum aromaticum strain EbN1, Azoarcus sp. EbN1
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