Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
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colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
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[Homology]
Score
ebA5163Transcriptional regulator, AraC family. (343 aa)    
Predicted Functional Partners:
rpoA
DNA-directed RNA polymerase (alpha subunit); DNA-dependent RNA polymerase catalyzes the transcription of DNA into RNA using the four ribonucleoside triphosphates as substrates.
    
 
 0.565
ebA5020
Predicted nucleoside-diphosphate-sugar epimerases.
 
   
 0.539
ebA6051
Putative sensory transduction histidine kinase of highly complex domain structure.
  
  
 0.474
ebA5059
Predicted permease.
  
    0.459
ebA4655
Putative transcriptional regulatory protein.
  
     0.456
ebD85
Conserved hypothetical protein.
  
     0.430
ebA5167
Conserved hypothetical protein.
 
     0.425
ebA2026
Putative regulatory protein, LuxR.
  
   
 0.415
Your Current Organism:
Aromatoleum aromaticum
NCBI taxonomy Id: 76114
Other names: A. aromaticum EbN1, Aromatoleum aromaticum EbN1, Aromatoleum aromaticum str. EbN1, Aromatoleum aromaticum strain EbN1, Azoarcus sp. EbN1
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