STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
ebA5188Hypothetical protein. (305 aa)    
Predicted Functional Partners:
qhpB-2
Quinohemoprotein amine dehydrogenase 40 kDa subunit.
 
    0.920
ebA5187
Hypothetical protein.
 
     0.901
ebA5186
ABC efflux transporter, permease/ATP-binding protein.
 
     0.888
qhpC
Quinohemoprotein amine dehydrogenase gamma subunit.
 
     0.844
ebA5191
Conserved hypothetical protein,predicted Peptidase U32 family.
 
     0.829
qhpA-2
Quinohemoprotein amine dehydrogenase 60 kDa subunit.
 
 
   0.809
fdhB
Formate dehydrogenase, NAD(P) reducing, beta subunit.
   
   0.781
padD
Phenylacetyl-CoA:acceptor oxidoreductase.
  
     0.773
ORF3
Putative regulatory protein,conserved in anaerobic benzoate degadation gene clusters.
  
     0.759
padB
Phenylacetyl-CoA:acceptor oxidoreductase; Belongs to the prokaryotic molybdopterin-containing oxidoreductase family.
  
     0.753
Your Current Organism:
Aromatoleum aromaticum
NCBI taxonomy Id: 76114
Other names: A. aromaticum EbN1, Aromatoleum aromaticum EbN1, Aromatoleum aromaticum str. EbN1, Aromatoleum aromaticum strain EbN1, Azoarcus sp. EbN1
Server load: medium (48%) [HD]
STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.