STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
ebA5221Putative cytoplasmic protein. (192 aa)    
Predicted Functional Partners:
ebA5222
ATPase-like protein.
 
   0.995
ebA5249
Conserved hypothetical protein.
 
 
 0.980
ebA5220
Conserved hypothetical protein.
 
    0.976
ebA5225
Conserved hypothetical protein.
 
  
 0.916
ebA5250
Putative ATP-dependent Lon protease.
 
  
 0.915
ebA264
Hypothetical protein.
 
  
 0.626
ebA5244
Hypothetical protein containing the PIWI domain.
  
     0.624
ebA5435
Conserved hypothetical protein, probable DNA/RNA helicase.
  
    0.514
ebA267
Hypothetical protein.
  
    0.437
ebA272
Hypothetical protein; INTERPRO suggestion: Rhodopsin-like G-protein coupled receptor superfamily.
  
    0.437
Your Current Organism:
Aromatoleum aromaticum
NCBI taxonomy Id: 76114
Other names: A. aromaticum EbN1, Aromatoleum aromaticum EbN1, Aromatoleum aromaticum str. EbN1, Aromatoleum aromaticum strain EbN1, Azoarcus sp. EbN1
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.